--p_correction

Switch

--p_correction

Description

Specifies a p-value correction method (for multiple comparisons) in correlation other than Bonferroni (which is turned off with --no_bonferroni)

Argument and Default Value

Argument: method to use

Details

Possible values include: simes, holm, hochberg, hommel, bonferroni, BH, BY, fdr, none

simes is built into featureWorker; anything else calls R's stats module, specifically the p_adjust command

Other Switches

Required Switches: fwflag_no_bonferroni --correlate Optional Switches: None

Example Commands